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timecoursedata

A data package for timecourse RNA-seq and microarray gene expression data sets

Bioconductor version: 3.23 · Package version: 1.22.0

This data package contains timecourse gene expression data sets. The first dataset, from Shoemaker et al, consists of microarray samples from lung tissue of mice exposed to different influenzy strains from 14 timepoints. The two other datasets are leaf and root samples from sorghum crops exposed to pre- and post-flowering drought stress and a control condition, sampled across the plants lifetime.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("timecoursedata")

Details

MaintainerNelle Varoquaux <nelle.varoquaux@gmail.com>
AuthorElizabeth Purdom [aut] (ORCID: <https://orcid.org/0000-0001-9455-7990>), Nelle Varoquaux [aut, cre] (ORCID: <https://orcid.org/0000-0002-8748-6546>)
LicenseBSD 3-clause License + file LICENSE
Downloads rank115
Source branchRELEASE_3_23
biocViewsExperimentData, ExpressionData, MicroarrayData, RNASeqData

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Dependencies

Depends: R (>= 4.0), SummarizedExperiment

Suggests: testthat (>= 1.0.0), knitr, rmarkdown, markdown, covr, BiocStyle

Reverse dependencies

Suggests Me (1): moanin