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tidyprint

Custom Print Methods for SummarizedExperiment

Bioconductor version: 3.23 · Package version: 1.0.0

Provides customized print methods for 'SummarizedExperiment' objects to enhance readability and usability within a tidy workflow. It offers consistent, tidyverse-aligned console displays, including alternative tibble abstractions for large genomic data to improve discoverability and interpretation. The package also includes unified, contextual messaging utilities intended for the 'tidyomics' ecosystem.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("tidyprint")

Details

MaintainerChen Zhan <chen.zhan@adelaide.edu.au>
AuthorChen Zhan [aut, cre] (ORCID: <https://orcid.org/0000-0002-4794-8339>)
LicenseGPL-3
URLhttps://github.com/tidyomics/tidyprint
Bug Reportshttps://github.com/tidyomics/tidyprint/issues
Downloads rank57
Source branchRELEASE_3_23
biocViewsInfrastructure, Software, Visualization

Documentation

Download

Dependencies

Depends: R (>= 4.4.0)

Imports: magrittr, tidyr, tibble, dplyr, purrr, pillar, S4Vectors, stringr, cli, vctrs, SummarizedExperiment, methods, rlang, fansi, pkgconfig

Suggests: knitr, rmarkdown, BiocStyle, airway, pasilla, testthat (>= 3.0.0)