tRNA
Analyzing tRNA sequences and structures
Bioconductor version: 3.23 · Package version: 1.30.0
The tRNA package allows tRNA sequences and structures to be accessed and used for subsetting. In addition, it provides visualization tools to compare feature parameters of multiple tRNA sets and correlate them to additional data. The tRNA package uses GRanges objects as inputs requiring only few additional column data sets.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("tRNA") Details
| Maintainer | Felix GM Ernst <felix.gm.ernst@outlook.com> |
| Author | Felix GM Ernst [aut, cre] (ORCID: <https://orcid.org/0000-0001-5064-0928>) |
| License | GPL-3 + file LICENSE |
| Bug Reports | https://github.com/FelixErnst/tRNA/issues |
| Downloads rank | 378 |
| Source branch | RELEASE_3_23 |
| biocViews | Software, Visualization |
Documentation
Download
Dependencies
Depends: R (>= 3.5), GenomicRanges, Structstrings
Imports: stringr, S4Vectors, methods, BiocGenerics, IRanges, XVector, Biostrings, Modstrings, ggplot2, scales
Suggests: knitr, rmarkdown, testthat, BiocStyle, tRNAscanImport
Reverse dependencies
Depends On Me (2): tRNAdbImport, tRNAscanImport