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spatialDmelxsim

Spatial allelic expression counts for fly cross embryo

Bioconductor version: 3.23 · Package version: 1.18.0

Spatial allelic expression counts from Combs & Fraser (2018), compiled into a SummarizedExperiment object. This package contains data of allelic expression counts of spatial slices of a fly embryo, a Drosophila melanogaster x Drosophila simulans cross. See the CITATION file for the data source, and the associated script for how the object was constructed from publicly available data.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("spatialDmelxsim")

Details

MaintainerMichael Love <michaelisaiahlove@gmail.com>
AuthorMichael Love [aut, cre]
LicenseGPL-3
URLhttps://github.com/mikelove/spatialDmelxsim
Bug Reportshttps://github.com/mikelove/spatialDmelxsim/issues
Downloads rank96
Source branchRELEASE_3_23
biocViewsDrosophila_melanogaster_Data, ExperimentData, ExperimentHub, ExpressionData, GEO, RNASeqData, SequencingData

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Dependencies

Depends: R (>= 4.1), ExperimentHub, SummarizedExperiment

Imports: utils

Suggests: knitr, rmarkdown, BiocStyle