scds
In-Silico Annotation of Doublets for Single Cell RNA Sequencing Data
Bioconductor version: 3.23 · Package version: 2.0.0
In single cell RNA sequencing (scRNA-seq) data combinations of cells are sometimes considered a single cell (doublets). The scds package provides methods to annotate doublets in scRNA-seq data computationally.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("scds")Details
| Maintainer | Dennis Kostka <kostka@pitt.edu> |
| Author | Dennis Kostka [aut, cre], Bais Abha [aut] |
| License | MIT + file LICENSE |
| Downloads rank | 988 |
| Source branch | RELEASE_3_23 |
| biocViews | Classification, GeneExpression, Preprocessing, QualityControl, RNASeq, Sequencing, SingleCell, Software, Transcriptomics |