scATAC.Explorer

A Collection of Single-cell ATAC Sequencing Datasets and Corresponding Metadata

Bioconductor version: 3.23 · Package version: 1.18.0

This package provides a tool to search and download a collection of publicly available single cell ATAC-seq datasets and their metadata. scATAC-Explorer aims to act as a single point of entry for users looking to study single cell ATAC-seq data. Users can quickly search available datasets using the metadata table and download datasets of interest for immediate analysis within R.

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("scATAC.Explorer")