recount3

Explore and download data from the recount3 project

Bioconductor version: 3.23 · Package version: 1.22.0

The recount3 package enables access to a large amount of uniformly processed RNA-seq data from human and mouse. You can download RangedSummarizedExperiment objects at the gene, exon or exon-exon junctions level with sample metadata and QC statistics. In addition we provide access to sample coverage BigWig files.

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("recount3")