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raerdata

A collection of datasets for use with raer package

Bioconductor version: 3.23 · Package version: 1.10.0

raerdata is an ExperimentHub package that provides a collection of files useful for demostrating functionality in the raer package. Datasets include 10x genomics scRNA-seq, bulk RNA-seq, and paired whole-genome and RNA-seq data. Additionally databases of human and mouse RNA editing sites are provided.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("raerdata")

Details

MaintainerKent Riemondy <kent.riemondy@cuanschutz.edu>
AuthorKent Riemondy [aut, cre] (ORCID: <https://orcid.org/0000-0003-0750-1273>)
LicenseMIT + file LICENSE
URLhttps://github.com/rnabioco/raerdata
Bug Reportshttps://github.com/rnabioco/raerdata/issues
Downloads rank96
Source branchRELEASE_3_23
biocViewsExperimentData, ExperimentHub, ExpressionData, PackageTypeData, RNASeqData, SequencingData, SingleCellData

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Dependencies

Imports: ExperimentHub, Rsamtools, BiocGenerics, rtracklayer, SingleCellExperiment

Suggests: rmarkdown, knitr, BiocStyle, testthat (>= 3.0.0)

Reverse dependencies

Suggests Me (1): raer