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qcmetrics

A Framework for Quality Control

Bioconductor version: 3.23 · Package version: 1.50.0

The package provides a framework for generic quality control of data. It permits to create, manage and visualise individual or sets of quality control metrics and generate quality control reports in various formats.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("qcmetrics")

Details

MaintainerLaurent Gatto <laurent.gatto@uclouvain.be>
AuthorLaurent Gatto [aut, cre]
LicenseGPL-2
URLhttp://lgatto.github.io/qcmetrics/articles/qcmetrics.html
Bug Reportshttps://github.com/lgatto/qcmetrics/issues
Downloads rank479
Source branchRELEASE_3_23
biocViewsImmunoOncology, MassSpectrometry, Microarray, Proteomics, QualityControl, ReportWriting, Software, Visualization

Documentation

Download

Dependencies

Depends: R (>= 3.3)

Imports: Biobase, methods, knitr, tools, xtable, pander, S4Vectors

Suggests: affy, MSnbase, ggplot2, lattice, mzR, BiocStyle, rmarkdown, markdown

Reverse dependencies

Imports Me (1): MSstatsQC