orthosData
Data for the orthos package
Bioconductor version: 3.23 · Package version: 1.10.0
`orthosData` is the companion ExperimentData package to the `orthos` R package for mechanistic studies using differential gene expression experiments. It provides functions for retrieval from ExperimentHub and local caching of the models and datasets used internally in orthos.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("orthosData") Details
| Maintainer | Panagiotis Papasaikas <panagiotis.papasaikas@fmi.ch> |
| Author | Panagiotis Papasaikas [aut, cre] (ORCID: <https://orcid.org/0000-0002-1640-7636>), Charlotte Soneson [aut] (ORCID: <https://orcid.org/0000-0003-3833-2169>), Michael Stadler [aut] (ORCID: <https://orcid.org/0000-0002-2269-4934>), Friedrich Miescher Institute for Biomedical Research [cph] |
| License | MIT + file LICENSE |
| URL | https://github.com/fmicompbio/orthosData |
| Bug Reports | https://github.com/fmicompbio/orthosData/issues |
| Downloads rank | 106 |
| Source branch | RELEASE_3_23 |
| biocViews | ExperimentData, ExperimentHub, RNASeqData |
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Dependencies
Imports: AnnotationHub, BiocFileCache, ExperimentHub, HDF5Array, stringr, SummarizedExperiment
Reverse dependencies
Imports Me (1): orthos