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optimalFlow

optimalFlow

Bioconductor version: 3.23 · Package version: 1.24.0

Optimal-transport techniques applied to supervised flow cytometry gating.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("optimalFlow")

Details

MaintainerHristo Inouzhe <hristo.inouzhe@gmail.com>
AuthorHristo Inouzhe <hristo.inouzhe@gmail.com>
LicenseArtistic-2.0
Downloads rank223
Source branchRELEASE_3_23
biocViewsFlowCytometry, Software, Technology

Documentation

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Dependencies

Depends: dplyr, optimalFlowData, rlang (>= 0.4.0)

Imports: transport, parallel, Rfast, robustbase, dbscan, randomForest, foreach, graphics, doParallel, stats, flowMeans, rgl, ellipse

Suggests: knitr, BiocStyle, rmarkdown, magick