muscData

Multi-sample multi-group scRNA-seq data

Bioconductor version: 3.23 · Package version: 1.26.0

Data package containing a collection of multi-sample multi-group scRNA-seq datasets in SingleCellExperiment Bioconductor object format.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("muscData")

Maintainer	Helena L. Crowell <helena.crowell@uzh.ch>
Author	Helena L. Crowell [aut, cre]
License	MIT + file LICENSE
URL	https://github.com/HelenaLC/muscData
Bug Reports	https://github.com/HelenaLC/muscData/issues
Downloads rank	542
Source branch	RELEASE_3_23
biocViews	ExperimentData, ExperimentHub, ExpressionData, GEO, Homo_sapiens_Data, ImmunoOncologyData, SingleCellData

Dependencies

Depends: R (>= 3.6), ExperimentHub, SingleCellExperiment

Imports: utils

Suggests: BiocStyle, dplyr, DropletUtils, knitr, GEOquery, Matrix, matrixStats, methods, muscat, rmarkdown, R.utils, readxl, scater, scds, Seurat

Reverse dependencies

Suggests Me (2): dreamlet, glmGamPoi