muleaData
Genes Sets for Functional Enrichment Analysis with the 'mulea' R Package
Bioconductor version: 3.23 · Package version: 1.8.0
ExperimentHubData package for the 'mulea' comprehensive overrepresentation and functional enrichment analyser R package. Here we provide ontologies (gene sets) in a data.frame for 27 different organisms, ranging from Escherichia coli to human, all acquired from publicly available data sources. Each ontology is provided with multiple gene and protein identifiers. Please see the NEWS file for a list of changes in each version.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("muleaData") Details
| Maintainer | Eszter Ari <arieszter@gmail.com> |
| Author | Eszter Ari [aut, cre] (ORCID: <https://orcid.org/0000-0001-7774-1067>), Márton Ölbei [aut] (ORCID: <https://orcid.org/0000-0002-4903-6237>), Lejla Gul [aut], Balázs Bohár [aut] (ORCID: <https://orcid.org/0000-0002-3033-5448>), Tamás Stirling [aut] (ORCID: <https://orcid.org/0000-0002-8964-6443>) |
| License | MIT + file LICENSE |
| URL | https://github.com/ELTEbioinformatics/muleaData |
| Bug Reports | https://support.bioconductor.org/tag/muleaData/issues |
| Downloads rank | 85 |
| Source branch | RELEASE_3_23 |
| biocViews | Arabidopsis_thaliana_Data, Bacillus_subtilis_Data, Caenorhabditis_elegans_Data, ChIPSeqData, DNASeqData, Danio_rerio_Data, Drosophila_melanogaster_Data, Escherichia_coli_Data, ExperimentData, ExperimentHub, ExpressionData, Homo_sapiens_Data, Pan_troglodytes_Data, Pseudomonas_aeruginosa_Data, Rattus_norvegicus_Data, Saccharomyces_cerevisiae_Data, Staphylococcus_aureus_Data, miRNAData |
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Dependencies
Suggests: knitr, rmarkdown, ExperimentHub, dplyr