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methylclockData

Data for methylclock package

Bioconductor version: 3.23 · Package version: 1.20.0

Collection of 9 datasets, andrews and bakulski cord blood, blood gse35069, blood gse35069 chen, blood gse35069 complete, combined cord blood, cord bloo d gse68456, gervin and lyle cord blood, guintivano dlpfc and saliva gse48472". Data downloaded from [meffil](https://github.com/perishky/meffil/). Data used to estimate cell counts using Extrinsic epigenetic age acceleration (EEAA) method Collection of 12 datasets to use with MethylClock package to estimate chronological and gestational DNA methylationwith estimators to use wit different methylation clocks

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("methylclockData")

Details

MaintainerDolors Pelegri-Siso <dolors.pelegri@isglobal.org>
AuthorJuan R. Gonzalez [aut], Dolors Pelegri-Siso [aut, cre]
LicenseMIT + file LICENSE
URLhttps://github.com/isglobal-brge/methylclockData
Bug Reportshttps://github.com/isglobal-brge/methylclockData/issues
Downloads rank316
Source branchRELEASE_3_23
biocViewsExperimentData, ExperimentHub, Homo_sapiens_Data, OrganismData, SpecimenSource, Tissue

Download

Dependencies

Imports: ExperimentHubData, ExperimentHub, utils

Suggests: knitr, BiocStyle, rmarkdown

Reverse dependencies

Depends On Me (1): methylclock