methrix

Fast and efficient summarization of generic bedGraph files from Bisufite sequencing

Bioconductor version: 3.23 · Package version: 1.26.0

Bedgraph files generated by Bisulfite pipelines often come in various flavors. Critical downstream step requires summarization of these files into methylation/coverage matrices. This step of data aggregation is done by Methrix, including many other useful downstream functions.

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("methrix")