metaboliteIDmapping
Mapping of Metabolite IDs from Different Sources
Bioconductor version: 3.23 · Package version: 1.0.0
The package provides a comprehensive mapping table of nine different Metabolite ID formats and their common name. The data has been collected and merged from four publicly available source, including HMDB, Comptox Dashboard, ChEBI, and the graphite Bioconductor R package.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("metaboliteIDmapping") Details
| Maintainer | Sebastian Canzler <sebastian.canzler@ufz.de> |
| Author | Sebastian Canzler [aut, cre] (<https://orcid.org/0000-0001-7935-9582>) |
| License | GPL-3 |
| URL | https://github.com/yigbt/metaboliteIDmapping |
| Downloads rank | 165 |
| Source branch | RELEASE_3_23 |
| biocViews | AnnotationData, AnnotationHub, CustomDBSchema, FunctionalAnnotation |
Download
Dependencies
Depends: R (>= 4.0.0)
Imports: AnnotationHub
Suggests: magrittr, graphite, dplyr, tidyr, tibble, rappdirs, XML, readxl, stringr, utils, knitr, sets, R.utils, readr, conflicted, rmarkdown
Reverse dependencies
Imports Me (1): multiGSEA