metaMS

MS-based metabolomics annotation pipeline

Bioconductor version: 3.23 · Package version: 1.48.0

MS-based metabolomics data processing and compound annotation pipeline.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("metaMS")

Maintainer	Yann Guitton <yann.guitton@gmail.com>
Author	Ron Wehrens [aut] (author of GC-MS part, Initial Maintainer), Pietro Franceschi [aut] (author of LC-MS part), Nir Shahaf [ctb], Matthias Scholz [ctb], Georg Weingart [ctb] (development of GC-MS approach), Elisabete Carvalho [ctb] (testing and feedback of GC-MS pipeline), Yann Guitton [ctb, cre] (ORCID: <https://orcid.org/0000-0002-4479-0636>), Julien Saint-Vanne [ctb]
License	GPL (>= 2)
URL	https://github.com/yguitton/metaMS
Downloads rank	423
Source branch	RELEASE_3_23
biocViews	ImmunoOncology, MassSpectrometry, Metabolomics, Software

Dependencies

Depends: R (>= 4.0), methods, CAMERA, xcms (>= 1.35)

Imports: Matrix, tools, robustbase, BiocGenerics, graphics, stats, utils

Suggests: metaMSdata, RUnit

Reverse dependencies

Suggests Me (1): CluMSID