leapR
Layered enrichment analysis of pathways R
Bioconductor version: 3.23 · Package version: 1.0.0
leapR is a package that identifies pathways that are enriched across diverse 'omics experiments. It leverages any tabular expression data (proteomics, transcriptomics) using the `SummarizedExperiment` object. It works with any pathway in the .gct file format.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("leapR")Details
| Maintainer | Sara Gosline <sara.gosline@pnnl.gov> |
| Author | Sara Gosline [aut, cre] (ORCID: <https://orcid.org/0000-0002-6534-4774>), Jason McDermott [aut], Jeremy Jacobson [aut], Vincent Danna [ctb], National Institutes of Health [fnd] |
| License | MIT + file LICENSE |
| Downloads rank | 61 |
| Source branch | RELEASE_3_23 |
| biocViews | GeneExpression, GeneSetEnrichment, Pathways, Proteomics, Software, Transcriptomics |