immApex

Tools for Adaptive Immune Receptor Sequence-Based Machine and Deep Learning

Bioconductor version: 3.23 · Package version: 1.6.0

A set of tools to for machine and deep learning in R from amino acid and nucleotide sequences focusing on adaptive immune receptors. The package includes pre-processing of sequences, unifying gene nomenclature usage, encoding sequences, and combining models. This package will serve as the basis of future immune receptor sequence functions/packages/models compatible with the scRepertoire ecosystem.

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("immApex")