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hmdbQuery

utilities for exploration of human metabolome database

Bioconductor version: 3.23 · Package version: 1.32.0

Define utilities for exploration of human metabolome database, including functions to retrieve specific metabolite entries and data snapshots with pairwise associations (metabolite-gene,-protein,-disease).

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("hmdbQuery")

Details

MaintainerVJ Carey <stvjc@channing.harvard.edu>
AuthorVince Carey <stvjc@channing.harvard.edu>
LicenseArtistic-2.0
StatusDeprecated
Downloads rank301
Source branchRELEASE_3_23
biocViewsInfrastructure, Metabolomics, Software

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Dependencies

Depends: R (>= 3.5), XML

Imports: S4Vectors, methods, utils

Suggests: knitr, annotate, gwascat, testthat, rmarkdown