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ggtreeDendro

Drawing 'dendrogram' using 'ggtree'

Bioconductor version: 3.23 · Package version: 1.14.0

Offers a set of 'autoplot' methods to visualize tree-like structures (e.g., hierarchical clustering and classification/regression trees) using 'ggtree'. You can adjust graphical parameters using grammar of graphic syntax and integrate external data to the tree.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ggtreeDendro")

Details

MaintainerGuangchuang Yu <guangchuangyu@gmail.com>
AuthorGuangchuang Yu [aut, cre, cph] (ORCID: <https://orcid.org/0000-0002-6485-8781>), Shuangbin Xu [ctb] (ORCID: <https://orcid.org/0000-0003-3513-5362>), Chuanjie Zhang [ctb]
LicenseArtistic-2.0
Downloads rank195
Source branchRELEASE_3_23
biocViewsClassification, Clustering, DecisionTree, Phylogenetics, Software, Visualization

Documentation

Download

Dependencies

Depends: ggtree (>= 3.5.3)

Imports: ggplot2, stats, tidytree, utils

Suggests: aplot, cluster, knitr, MASS, mdendro, prettydoc, pvclust, rmarkdown, testthat (>= 3.0.0), treeio, yulab.utils