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geneLenDataBase

Lengths of mRNA transcripts for a number of genomes

Bioconductor version: 3.23 · Package version: 1.48.0

Length of mRNA transcripts for a number of genomes and gene ID formats, largely based on UCSC table browser. Data objects are provided as individual pieces of information to be retrieved and loaded. A variety of different gene identifiers and genomes is supported to ensure wide applicability.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("geneLenDataBase")

Details

MaintainerFederico Marini <marinif@uni-mainz.de>
AuthorMatthew Young [aut], Nadia Davidson [aut], Federico Marini [ctb, cre] (ORCID: <https://orcid.org/0000-0003-3252-7758>)
LicenseLGPL (>= 2)
URLhttps://github.com/federicomarini/geneLenDataBase
Bug Reportshttps://github.com/federicomarini/geneLenDataBase/issues
Downloads rank2122
Source branchRELEASE_3_23
biocViewsExperimentData, Genome

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Dependencies

Depends: R (>= 2.11.0)

Imports: utils, rtracklayer, GenomicFeatures, txdbmaker

Reverse dependencies

Depends On Me (1): goseq

Imports Me (1): SMITE