gatom

Finding an Active Metabolic Module in Atom Transition Network

Bioconductor version: 3.23 · Package version: 1.10.2

This package implements a metabolic network analysis pipeline to identify an active metabolic module based on high throughput data. The pipeline takes as input transcriptional and/or metabolic data and finds a metabolic subnetwork (module) most regulated between the two conditions of interest. The package further provides functions for module post-processing, annotation and visualization.

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("gatom")