gDR

Umbrella package for R packages in the gDR suite

Bioconductor version: 3.23 · Package version: 1.10.0

Package is a part of the gDR suite. It reexports functions from other packages in the gDR suite that contain critical processing functions and utilities. The vignette walks through the full processing pipeline for drug response analyses that the gDR suite offers.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("gDR")

Details

Maintainer	Arkadiusz Gladki <gladki.arkadiusz@gmail.com>
Author	Allison Vuong [aut], Bartosz Czech [aut] (ORCID: <https://orcid.org/0000-0002-9908-3007>), Arkadiusz Gladki [cre, aut] (ORCID: <https://orcid.org/0000-0002-7059-6378>), Marc Hafner [aut] (ORCID: <https://orcid.org/0000-0003-1337-7598>), Dariusz Scigocki [aut], Janina Smola [aut], Sergiu Mocanu [aut]
License	Artistic-2.0
URL	https://github.com/gdrplatform/gDR, https://gdrplatform.github.io/gDR/
Bug Reports	https://github.com/gdrplatform/gDR/issues
Downloads rank	175
Source branch	RELEASE_3_23
biocViews	DataImport, ShinyApps, Software

Documentation

gDR suite

Download

Source package

Dependencies

Depends: R (>= 4.2), gDRcore (>= 1.7.1), gDRimport (>= 1.7.1), gDRutils (>= 1.7.1)

Suggests: BiocStyle, BumpyMatrix, futile.logger, gDRstyle (>= 1.7.1), gDRtestData (>= 1.7.1), kableExtra, knitr, markdown, purrr, rmarkdown, SummarizedExperiment, testthat, yaml