gDNAinRNAseqData
RNA-seq data with different levels of gDNA contamination
Bioconductor version: 3.23 · Package version: 1.12.0
Provides access to BAM files generated from RNA-seq data produced with different levels of gDNA contamination. It currently allows one to download a subset of the data published by Li et al., BMC Genomics, 23:554, 2022. This subset of data is formed by BAM files with about 100,000 alignments with three different levels of gDNA contamination.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("gDNAinRNAseqData") Details
| Maintainer | Robert Castelo <robert.castelo@upf.edu> |
| Author | Robert Castelo [aut, cre] (ORCID: <https://orcid.org/0000-0003-2229-4508>) |
| License | Artistic-2.0 |
| URL | https://github.com/functionalgenomics/gDNAinRNAseqData |
| Bug Reports | https://github.com/functionalgenomics/gDNAinRNAseqData |
| Downloads rank | 97 |
| Source branch | RELEASE_3_23 |
| biocViews | ExperimentData, ExperimentHub, ExpressionData, Homo_sapiens_Data, RNASeqData, SequencingData |
Download
Reverse dependencies
Suggests Me (1): gDNAx