frenchFISH

Poisson Models for Quantifying DNA Copy-number from FISH Images of Tissue Sections

Bioconductor version: 3.23 · Package version: 1.24.0

FrenchFISH comprises a nuclear volume correction method coupled with two types of Poisson models: either a Poisson model for improved manual spot counting without the need for control probes; or a homogenous Poisson Point Process model for automated spot counting.

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("frenchFISH")