flowCut
Automated Removal of Outlier Events and Flagging of Files Based on Time Versus Fluorescence Analysis
Bioconductor version: 3.23 · Package version: 1.22.0
Common techinical complications such as clogging can result in spurious events and fluorescence intensity shifting, flowCut is designed to detect and remove technical artifacts from your data by removing segments that show statistical differences from other segments.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("flowCut") Details
| Maintainer | Justin Meskas <justinmeskas@gmail.com> |
| Author | Justin Meskas [cre, aut], Sherrie Wang [aut] |
| License | Artistic-2.0 |
| Downloads rank | 346 |
| Source branch | RELEASE_3_23 |
| biocViews | CellBasedAssays, FlowCytometry, Preprocessing, QualityControl, Software |
Documentation
Download
Dependencies
Depends: R (>= 3.4), flowCore
Imports: flowDensity (>= 1.13.1), Cairo, e1071, grDevices, graphics, stats, methods
Suggests: RUnit, BiocGenerics, knitr, markdown, rmarkdown