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drawProteins

Package to Draw Protein Schematics from Uniprot API output

Bioconductor version: 3.23 · Package version: 1.32.0

This package draws protein schematics from Uniprot API output. From the JSON returned by the GET command, it creates a dataframe from the Uniprot Features API. This dataframe can then be used by geoms based on ggplot2 and base R to draw protein schematics.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("drawProteins")

Details

MaintainerPaul Brennan <brennanpincardiff@gmail.com>
AuthorPaul Brennan [aut, cre]
LicenseMIT + file LICENSE
URLhttps://github.com/brennanpincardiff/drawProteins
Bug Reportshttps://github.com/brennanpincardiff/drawProteins/issues/new
Downloads rank340
Source branchRELEASE_3_23
biocViewsFunctionalPrediction, Proteomics, Software, Visualization

Documentation

Download

Dependencies

Depends: R (>= 4.0)

Imports: ggplot2, httr, dplyr, readr, tidyr

Suggests: covr, testthat, knitr, rmarkdown, BiocStyle

Reverse dependencies

Imports Me (1): factR