demuxmix

Demultiplexing oligo-barcoded scRNA-seq data using regression mixture models

Bioconductor version: 3.23 · Package version: 1.14.0

A package for demultiplexing single-cell sequencing experiments of pooled cells labeled with barcode oligonucleotides. The package implements methods to fit regression mixture models for a probabilistic classification of cells, including multiplet detection. Demultiplexing error rates can be estimated, and methods for quality control are provided.

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("demuxmix")