dStruct
Identifying differentially reactive regions from RNA structurome profiling data
Bioconductor version: 3.23 · Package version: 1.18.0
dStruct identifies differentially reactive regions from RNA structurome profiling data. dStruct is compatible with a broad range of structurome profiling technologies, e.g., SHAPE-MaP, DMS-MaPseq, Structure-Seq, SHAPE-Seq, etc. See Choudhary et al., Genome Biology, 2019 for the underlying method.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("dStruct")Details
| Maintainer | Krishna Choudhary <kchoudhary@ucdavis.edu> |
| Author | Krishna Choudhary [aut, cre] (ORCID: <https://orcid.org/0000-0002-7966-1527>), Sharon Aviran [aut] (ORCID: <https://orcid.org/0000-0003-1872-9820>) |
| License | GPL (>= 2) |
| URL | https://github.com/dataMaster-Kris/dStruct |
| Bug Reports | https://github.com/dataMaster-Kris/dStruct/issues |
| Downloads rank | 236 |
| Source branch | RELEASE_3_23 |
| biocViews | Sequencing, Software, StatisticalMethod, StructuralPrediction |