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customCMPdb

Customize and Query Compound Annotation Database

Bioconductor version: 3.23 · Package version: 1.22.0

This package serves as a query interface for important community collections of small molecules, while also allowing users to include custom compound collections.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("customCMPdb")

Details

MaintainerYuzhu Duan <yduan004@ucr.edu>
AuthorYuzhu Duan [aut, cre], Thomas Girke [aut]
LicenseArtistic-2.0
URLhttps://github.com/yduan004/customCMPdb/
Bug Reportshttps://github.com/yduan004/customCMPdb/issues
Downloads rank253
Source branchRELEASE_3_23
biocViewsAnnotationHubSoftware, Cheminformatics, Software

Documentation

Download

Dependencies

Depends: R (>= 4.0)

Imports: AnnotationHub, RSQLite, XML, utils, ChemmineR, methods, stats, rappdirs, BiocFileCache

Suggests: knitr, rmarkdown, testthat, BiocStyle