curatedTBData
Curation of existing tuberculosis transcriptomic studies
Bioconductor version: 3.23 · Package version: 2.8.0
The curatedTBData is an R package that provides standardized, curated tuberculosis(TB) transcriptomic studies. The initial release of the package contains 49 studies. The curatedTBData package allows users to access tuberculosis trancriptomic efficiently and to make efficient comparison for different TB gene signatures across multiple datasets.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("curatedTBData") Details
| Maintainer | Xutao Wang <xutaow@bu.edu> |
| Author | Xutao Wang [aut, cre], W. Evan Johnson [aut], Prasad Patil [aut] |
| License | MIT + file LICENSE |
| URL | https://github.com/compbiomed/curatedTBData |
| Bug Reports | https://github.com/compbiomed/curatedTBData/issues |
| Downloads rank | 109 |
| Source branch | RELEASE_3_23 |
| biocViews | ExperimentData, ExperimentHub, GEO, Homo_sapiens_Data |
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Dependencies
Depends: R (>= 4.3.0)
Imports: AnnotationHub, ExperimentHub, MultiAssayExperiment, rlang, stats
Suggests: BiocStyle, DT, dplyr, HGNChelper, knitr, methods, rmarkdown, SummarizedExperiment, sva, testthat
Reverse dependencies
Suggests Me (1): BatchQC