clustifyr

Classifier for Single-cell RNA-seq Using Cell Clusters

Bioconductor version: 3.23 · Package version: 1.24.0

Package designed to aid in classifying cells from single-cell RNA sequencing data using external reference data (e.g., bulk RNA-seq, scRNA-seq, microarray, gene lists). A variety of correlation based methods and gene list enrichment methods are provided to assist cell type assignment.

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("clustifyr")