blacksheepr
Outlier Analysis for pairwise differential comparison
Bioconductor version: 3.23 · Package version: 1.26.0
Blacksheep is a tool designed for outlier analysis in the context of pairwise comparisons in an effort to find distinguishing characteristics from two groups. This tool was designed to be applied for biological applications such as phosphoproteomics or transcriptomics, but it can be used for any data that can be represented by a 2D table, and has two sub populations within the table to compare.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("blacksheepr") Details
| Maintainer | RugglesLab <ruggleslab@gmail.com> |
| Author | MacIntosh Cornwell [aut], RugglesLab [cre] |
| License | MIT + file LICENSE |
| Bug Reports | https://github.com/ruggleslab/blacksheepr/issues |
| Downloads rank | 274 |
| Source branch | RELEASE_3_23 |
| biocViews | DifferentialExpression, GeneExpression, RNASeq, Sequencing, Software, Transcription, Transcriptomics |
Documentation
Download
Dependencies
Depends: R (>= 3.6)
Imports: grid, stats, grDevices, utils, circlize, viridis, RColorBrewer, ComplexHeatmap, SummarizedExperiment, pasilla
Suggests: testthat (>= 2.1.0), knitr, BiocStyle, rmarkdown, curl