bettr

A Better Way To Explore What Is Best

Bioconductor version: 3.23 · Package version: 1.8.0

bettr provides a set of interactive visualization methods to explore the results of a benchmarking study, where typically more than a single performance measures are computed. The user can weight the performance measures according to their preferences. Performance measures can also be grouped and aggregated according to additional annotations.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("bettr")

Details

Maintainer	Charlotte Soneson <charlottesoneson@gmail.com>
Author	Federico Marini [aut] (ORCID: <https://orcid.org/0000-0003-3252-7758>), Charlotte Soneson [aut, cre] (ORCID: <https://orcid.org/0000-0003-3833-2169>), Daniel Incicau [aut] (ORCID: <https://orcid.org/0009-0001-1748-6145>)
License	MIT + file LICENSE
URL	https://github.com/federicomarini/bettr
Bug Reports	https://github.com/federicomarini/bettr/issues
Downloads rank	184
Source branch	RELEASE_3_23
biocViews	GUI, ShinyApps, Software, Visualization

Documentation

Download

Source package

Dependencies

Depends: R (>= 4.4.0)

Imports: dplyr (>= 1.0), tidyr, ggplot2 (>= 3.4.1), shiny (>= 1.6), tibble, ComplexHeatmap, bslib, rlang, circlize, stats, grid, methods, cowplot, Hmisc, sortable, shinyjqui, grDevices, scales, DT, SummarizedExperiment, S4Vectors, jsonlite, utils

Suggests: knitr, rmarkdown, testthat (>= 3.0.0), BiocStyle