bamsignals

Extract read count signals from bam files

Bioconductor version: 3.23 · Package version: 1.44.1

This package allows to efficiently obtain count vectors from indexed bam files. It counts the number of reads in given genomic ranges and it computes reads profiles and coverage profiles. It also handles paired-end data.

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("bamsignals")