aroma.light
Light-Weight Methods for Normalization and Visualization of Microarray Data using Only Basic R Data Types
Bioconductor version: 3.23 · Package version: 3.42.0
Methods for microarray analysis that take basic data types such as matrices and lists of vectors. These methods can be used standalone, be utilized in other packages, or be wrapped up in higher-level classes.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("aroma.light") Details
| Maintainer | Henrik Bengtsson <henrikb@braju.com> |
| Author | Henrik Bengtsson [aut, cre, cph], Pierre Neuvial [ctb], Aaron Lun [ctb] |
| License | GPL (>= 2) |
| URL | https://github.com/HenrikBengtsson/aroma.light, https://www.aroma-project.org |
| Bug Reports | https://github.com/HenrikBengtsson/aroma.light/issues |
| Downloads rank | 2036 |
| Source branch | RELEASE_3_23 |
| biocViews | Infrastructure, Microarray, MultiChannel, OneChannel, Preprocessing, Software, TwoChannel, Visualization |
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Dependencies
Depends: R (>= 2.15.2)
Imports: stats, R.methodsS3 (>= 1.7.1), R.oo (>= 1.23.0), R.utils (>= 2.9.0), matrixStats (>= 0.55.0)
Suggests: princurve (>= 2.1.4)
Reverse dependencies
Imports Me (4): EDASeq, EventPointer, PSCBS, scone
Suggests Me (4): aroma.affymetrix, aroma.cn, aroma.core, TIN