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alabaster.matrix

Load and Save Artifacts from File

Bioconductor version: 3.23 · Package version: 1.12.0

Save matrices, arrays and similar objects into file artifacts, and load them back into memory. This is a more portable alternative to serialization of such objects into RDS files. Each artifact is associated with metadata for further interpretation; downstream applications can enrich this metadata with context-specific properties.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("alabaster.matrix")

Details

MaintainerAaron Lun <infinite.monkeys.with.keyboards@gmail.com>
AuthorAaron Lun [aut, cre]
LicenseMIT + file LICENSE
Downloads rank4950
Source branchRELEASE_3_23
biocViewsDataImport, DataRepresentation, Software

Documentation

Download

Dependencies

Depends: alabaster.base

Imports: methods, BiocGenerics, S4Vectors, DelayedArray (>= 0.33.3), S4Arrays, SparseArray (>= 1.5.22), rhdf5 (>= 2.47.1), HDF5Array, Matrix, Rcpp

LinkingTo: Rcpp

Suggests: testthat, knitr, BiocStyle, chihaya, BiocSingular, ResidualMatrix

Reverse dependencies

Imports Me (5): alabaster, alabaster.se, celldex, scMultiome, scRNAseq

Suggests Me (1): alabaster.base