ZarrArray
Bring Zarr datasets in R as DelayedArray objects
Bioconductor version: 3.23 · Package version: 1.0.1
The ZarrArray package leverages the Rarr package to bring Zarr datasets in R as DelayedArray objects. The main class in the package is the ZarrArray class. A ZarrArray object is an array-like object that represents a Zarr dataset in R. ZarrArray objects are DelayedArray derivatives and therefore support all operations (delayed or block-processed) supported by DelayedArray objects.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ZarrArray")Details
| Maintainer | Hervé Pagès <hpages.on.github@gmail.com> |
| Author | Hervé Pagès [aut, cre] (ORCID: <https://orcid.org/0009-0002-8272-4522>), Mike Smith [aut] (ORCID: <https://orcid.org/0000-0002-7800-3848>), Hugo Gruson [aut] (ORCID: <https://orcid.org/0000-0002-4094-1476>), Artür Manukyan [aut] (ORCID: <https://orcid.org/0000-0002-0441-9517>), Levi Waldron [fnd] (ORCID: <https://orcid.org/0000-0003-2725-0694>) |
| License | Artistic-2.0 |
| URL | https://bioconductor.org/packages/ZarrArray |
| Bug Reports | https://github.com/Bioconductor/ZarrArray/issues |
| Downloads rank | 122 |
| Source branch | RELEASE_3_23 |
| biocViews | DataImport, DataRepresentation, Infrastructure, Software |
Documentation
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Dependencies
Depends: R (>= 3.4), methods, SparseArray, DelayedArray
Imports: stats, tools, BiocGenerics, S4Vectors, IRanges, S4Arrays, Rarr (>= 1.11.33)
Suggests: paws.storage, HDF5Array, testthat, knitr, rmarkdown, BiocStyle