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TPP2D

Detection of ligand-protein interactions from 2D thermal profiles (DLPTP)

Bioconductor version: 3.23 · Package version: 1.28.0

Detection of ligand-protein interactions from 2D thermal profiles (DLPTP), Performs an FDR-controlled analysis of 2D-TPP experiments by functional analysis of dose-response curves across temperatures.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("TPP2D")

Details

MaintainerNils Kurzawa <nilskurzawa@gmail.com>
AuthorNils Kurzawa [aut, cre], Holger Franken [aut], Simon Anders [aut], Wolfgang Huber [aut], Mikhail M. Savitski [aut]
LicenseGPL-3
URLhttp://bioconductor.org/packages/TPP2D
Bug Reportshttps://support.bioconductor.org/
Downloads rank276
Source branchRELEASE_3_23
biocViewsDataImport, Proteomics, Software

Documentation

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Dependencies

Depends: R (>= 3.6.0), stats, utils, dplyr, methods

Imports: ggplot2, tidyr, foreach, doParallel, openxlsx, stringr, RCurl, parallel, MASS, BiocParallel, limma

Suggests: knitr, testthat, rmarkdown, BiocStyle