SpatialDatasets
Collection of spatial omics datasets
Bioconductor version: 3.23 · Package version: 1.10.0
This is a collection of publically available spatial omics datasets. Where possible we have curated these datasets as either SpatialExperiments, MoleculeExperiments or CytoImageLists and included annotations of the sample characteristics.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("SpatialDatasets") Details
| Maintainer | Ellis Patrick <ellis.patrick@sydney.edu.au> |
| Author | Farhan Ameen [aut], Nick Robertson [aut], Alex Qin [aut], Shreya Rao [aut], Elijah Willie [aut], Ellis Patrick [aut, cre] |
| License | GPL-3 |
| URL | https://github.com/SydneyBioX/SpatialDatasets |
| Bug Reports | https://github.com/SydneyBioX/SpatialDatasets/issues |
| Downloads rank | 114 |
| Source branch | RELEASE_3_23 |
| biocViews | ExperimentData, ExperimentHub, Homo_sapiens_Data, Mus_musculus_Data, ReproducibleResearch, SingleCellData, SpatialData |
Download
Dependencies
Depends: ExperimentHub, SpatialExperiment
Imports: utils
Suggests: BiocStyle, knitr, rmarkdown, cytomapper