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Rtpca

Thermal proximity co-aggregation with R

Bioconductor version: 3.23 · Package version: 1.22.0

R package for performing thermal proximity co-aggregation analysis with thermal proteome profiling datasets to analyse protein complex assembly and (differential) protein-protein interactions across conditions.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Rtpca")

Details

MaintainerNils Kurzawa <nilskurzawa@gmail.com>
AuthorNils Kurzawa [aut, cre], André Mateus [aut], Mikhail M. Savitski [aut]
LicenseGPL-3
Bug Reportshttps://support.bioconductor.org/
Downloads rank271
Source branchRELEASE_3_23
biocViewsDataImport, Proteomics, Software

Documentation

Download

Dependencies

Depends: R (>= 4.0.0), stats, dplyr, tidyr

Imports: Biobase, methods, ggplot2, pROC, fdrtool, splines, utils, tibble

Suggests: knitr, BiocStyle, TPP, testthat, rmarkdown