RiboProfiling

Ribosome Profiling Data Analysis: from BAM to Data Representation and Interpretation

Bioconductor version: 3.23 · Package version: 1.42.0

Starting with a BAM file, this package provides the necessary functions for quality assessment, read start position recalibration, the counting of reads on CDS, 3'UTR, and 5'UTR, plotting of count data: pairs, log fold-change, codon frequency and coverage assessment, principal component analysis on codon coverage.

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RiboProfiling")