RaggedExperiment

Representation of Sparse Experiments and Assays Across Samples

Bioconductor version: 3.23 · Package version: 1.36.0

This package provides a flexible representation of copy number, mutation, and other data that fit into the ragged array schema for genomic location data. The basic representation of such data provides a rectangular flat table interface to the user with range information in the rows and samples/specimen in the columns. The RaggedExperiment class derives from a GRangesList representation and provides a semblance of a rectangular dataset.

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RaggedExperiment")