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RUVcorr

Removal of unwanted variation for gene-gene correlations and related analysis

Bioconductor version: 3.23 · Package version: 1.44.0

RUVcorr allows to apply global removal of unwanted variation (ridged version of RUV) to real and simulated gene expression data.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RUVcorr")

Details

MaintainerSaskia Freytag <saskia.freytag@perkins.uwa.edu.au>
AuthorSaskia Freytag
LicenseGPL-2
Downloads rank308
Source branchRELEASE_3_23
biocViewsGeneExpression, Normalization, Software

Documentation

Download

Dependencies

Imports: corrplot, MASS, stats, lattice, grDevices, gridExtra, snowfall, psych, BiocParallel, grid, bladderbatch, reshape2, graphics

Suggests: knitr, hgu133a2.db, rmarkdown