Bioc2026 Registration Open!

ROTS

Reproducibility-Optimized Test Statistic

Bioconductor version: 3.23 · Package version: 2.4.0

Calculates the Reproducibility-Optimized Test Statistic (ROTS) for differential testing in omics data.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ROTS")

Details

MaintainerTomi Suomi <tomi.suomi@utu.fi>
AuthorFatemeh Seyednasrollah, Tomi Suomi, Laura L. Elo
LicenseGPL (>= 2)
Downloads rank532
Source branchRELEASE_3_23
biocViewsDifferentialExpression, GeneExpression, ImmunoOncology, Microarray, Proteomics, RNASeq, Software

Documentation

Download

Dependencies

Depends: R (>= 3.6)

Imports: Rcpp, stats, Biobase, methods, BiocParallel, lme4, survival

LinkingTo: Rcpp

Suggests: testthat

Reverse dependencies

Imports Me (3): PECA, PRONE, RolDE

Suggests Me (2): LimROTS, wrProteo