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MouseThymusAgeing

Single-cell Transcriptomics Data of the Ageing Mouse Thymus

Bioconductor version: 3.23 · Package version: 1.20.0

This package provides data access to counts matrices and meta-data for single-cell RNA sequencing data of thymic epithlial cells across mouse ageing using SMARTseq2 and 10X Genommics chemistries. Access is provided as a data package via ExperimentHub. It is designed to facilitate the re-use of data from Baran-Gale _et al._ in a consistent format that includes relevant and informative meta-data.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MouseThymusAgeing")

Details

MaintainerMike Morgan <michael.morgan@abdn.ac.uk>
AuthorMike Morgan [aut, cre], Jeanette Baran-Gale [aut]
LicenseGPL-3
Bug Reportshttps://github.com/MarioniLab/MouseThymusAgeing/issues
Downloads rank152
Source branchRELEASE_3_23
biocViewsExperimentData, ExperimentHub, ExpressionData, SingleCellData

Download

Dependencies

Depends: SingleCellExperiment, SummarizedExperiment

Imports: ExperimentHub, methods, BiocGenerics, S4Vectors

Suggests: knitr, scuttle, rmarkdown, BiocStyle

Reverse dependencies

Suggests Me (1): miloR