MouseAgingData
Multi-omics data access for studies investigating the effects of aging
Bioconductor version: 3.23 · Package version: 1.8.0
The MouseAgingData package provides analysis-ready data resources from different studies focused on aging and rejuvenation in mice. The package currently provides two 10x Genomics single-cell RNA-seq datasets. The first study profiled the aging mouse brain measured across 37,089 cells (Ximerakis et al., 2019). The second study investigated parabiosis by profiling a total of 105,329 cells (Ximerakis & Holton et al., 2023). The datasets are provided as SingleCellExperiment objects and provide raw UMI counts and cell metadata.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MouseAgingData")Details
| Maintainer | Tram Nguyen <tram22.nguyen@gmail.com> |
| Author | Tram Nguyen [aut, cre] (ORCID: <https://orcid.org/0000-0003-4809-6227>), Kris Holton [aut], Tyrone Lee [aut], Nitesh Turaga [ctb], Ludwig Geistlinger [aut], Robert Gentleman [aut] |
| License | Artistic-2.0 |
| URL | https://github.com/ccb-hms/MouseAgingData |
| Bug Reports | https://github.com/ccb-hms/MouseAgingData/issues |
| Downloads rank | 90 |
| Source branch | RELEASE_3_23 |
| biocViews | ExperimentData, ExperimentHub, ExpressionData, Mus_musculus_Data, PackageTypeData, RNASeqData, SequencingData, SingleCellData |