Bioc2026 Registration Open!

MethylSeqData

Collection of Public DNA Methylation Sequencing Datasets

Bioconductor version: 3.23 · Package version: 1.22.0

Base-level (i.e. cytosine-level) counts for a collection of public bisulfite-seq datasets (e.g., WGBS and RRBS), provided as SummarizedExperiment objects with sample- and base-level metadata.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MethylSeqData")

Details

MaintainerPeter Hickey <peter.hickey@gmail.com>
AuthorPeter Hickey [aut, cre]
LicenseCC0
Downloads rank114
Source branchRELEASE_3_23
biocViewsExperimentData, ExperimentHub, Homo_sapiens_Data, MethylSeqData, Mus_musculus_Data, SequencingData

Download

Dependencies

Depends: SummarizedExperiment

Imports: ExperimentHub, HDF5Array, rhdf5, GenomeInfoDb, S4Vectors, GenomicRanges, stats, IRanges, utils

Suggests: BiocFileCache, BiocStyle, data.table, knitr, rmarkdown