MethylSeqData
Collection of Public DNA Methylation Sequencing Datasets
Bioconductor version: 3.23 · Package version: 1.22.0
Base-level (i.e. cytosine-level) counts for a collection of public bisulfite-seq datasets (e.g., WGBS and RRBS), provided as SummarizedExperiment objects with sample- and base-level metadata.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MethylSeqData") Details
| Maintainer | Peter Hickey <peter.hickey@gmail.com> |
| Author | Peter Hickey [aut, cre] |
| License | CC0 |
| Downloads rank | 114 |
| Source branch | RELEASE_3_23 |
| biocViews | ExperimentData, ExperimentHub, Homo_sapiens_Data, MethylSeqData, Mus_musculus_Data, SequencingData |
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Dependencies
Depends: SummarizedExperiment
Imports: ExperimentHub, HDF5Array, rhdf5, GenomeInfoDb, S4Vectors, GenomicRanges, stats, IRanges, utils
Suggests: BiocFileCache, BiocStyle, data.table, knitr, rmarkdown