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MafH5.gnomAD.v4.0.GRCh38

Minor allele frequency data from gnomAD version 4.0 for GRCh38

Bioconductor version: 3.23 · Package version: 3.19.0

Store minor allele frequency data from the Genome Aggregation Database (gnomAD version 4.0) for the human genome version GRCh38.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MafH5.gnomAD.v4.0.GRCh38")

Details

MaintainerRobert Castelo <robert.castelo@upf.edu>
AuthorRobert Castelo
LicenseArtistic-2.0
Downloads rank40
Source branchRELEASE_3_23
biocViewsAnnotationData, Genetics, GenomicScores, Homo_sapiens

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Dependencies

Depends: R (>= 4.0.0), GenomicScores (>= 2.7.2)

Imports: utils, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb, BSgenome, rhdf5, HDF5Array

Suggests: SNPlocs.Hsapiens.dbSNP149.GRCh38

Reverse dependencies

Suggests Me (1): GenomicScores